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Life is built from a small set of molecular families - carbohydrates, lipids, proteins and nucleic acids - assembled from monomers by condensation and broken down by hydrolysis. This chapter develops the structure of each family and links it to function, then treats enzymes as biological catalysts, the storage and transfer of information in DNA and ATP, and the properties of water and inorganic ions.
7 sections~24 min reading time3 competenciesLevel Foundation 1 · Standard 4 · Advanced 2
basic level
AS-Level requires the structures of the molecular families, the condensation/hydrolysis reactions, the biochemical tests and the enzyme model with its four factors.
higher level
The full A-Level expects the same content applied more quantitatively and synoptically - enzyme inhibition, DNA replication as evidence, and the properties of water and ions read across into later ecology and physiology topics.
Reading depth: In depth
Text size: Standard
A condensation reaction
Condensation of a linear polymer
Joining monomers forms bonds and releases water molecules; complete hydrolysis reverses this and consumes water molecules.
A glycogen branch is assembled from 200 alpha-glucose monomers joined into a single chain. How many water molecules are released, and how many would be needed to hydrolyse the chain completely back to glucose?
A linear chain of monomers contains glycosidic bonds, so bonds are formed.
Each condensation releases one water molecule, so 199 water molecules are released.
Hydrolysis reverses each condensation, so breaking all 199 bonds consumes 199 water molecules.
Result: 199 water molecules are released on synthesis and 199 are required for complete hydrolysis.
Typical mistakes
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A polypeptide is formed from 148 amino acids. State the number of peptide bonds present and the number of water molecules released during its synthesis.
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Sources: GCE AS and A level subject content for the sciences (Department for Education) · AQA A-level Biology 7402 specification (AQA)
Comparing the three glucose polysaccharides
Formation of a disaccharide
Two hexoses (total ) condense to a disaccharide plus one water; note the loss of .
A solution turns Benedict's reagent orange when first tested. A second portion of the same solution, boiled with hydrochloric acid, neutralised, then tested with Benedict's, turns brick-red. What can you conclude?
The orange colour is an intermediate positive result, so a reducing sugar (such as glucose or maltose) is present before any hydrolysis.
The stronger brick-red after acid hydrolysis shows that even more reducing sugar is now present; hydrolysis has broken a non-reducing sugar (such as sucrose) into its reducing monosaccharides.
The solution therefore contains both a reducing sugar and a non-reducing sugar. The deeper colour after hydrolysis is the diagnostic evidence for the non-reducing sugar.
Result: Both a reducing sugar and a non-reducing sugar (revealed by hydrolysis) are present.
Typical mistakes
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A student obtains a green colour with Benedict's solution before hydrolysis and a brick-red colour after acid hydrolysis and neutralisation. Explain what these results show about the sugars present.
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Sources: GCE AS and A level subject content for the sciences (Department for Education) · AQA A-level Biology 7402 specification (AQA)
A triglyceride
Triglyceride synthesis
Three ester bonds form, releasing three water molecules; hydrolysis reverses this.
A cell hydrolyses 5 triglyceride molecules completely to glycerol and fatty acids. How many ester bonds are broken and how many water molecules are used?
Each triglyceride contains three ester bonds (one per fatty acid).
ester bonds are broken.
Hydrolysis uses one water molecule per bond, so 15 water molecules are consumed.
Result: 15 ester bonds are broken and 15 water molecules are used.
Typical mistakes
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Explain, in terms of bonding and energy, why a triglyceride releases about twice as much energy per gram on oxidation as a carbohydrate such as glycogen.
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Sources: GCE AS and A level subject content for the sciences (Department for Education) · AQA A-level Biology 7402 specification (AQA)
Four levels of protein structure
Polypeptide formation
A chain of amino acids contains peptide bonds and releases water molecules.
A polypeptide is 305 amino acids long. State the number of peptide bonds it contains and the number of water molecules released when it was synthesised.
A chain of residues contains peptide bonds, so bonds.
Each peptide bond forms by condensation, releasing one water molecule, so 304 water molecules are released.
Result: 304 peptide bonds and 304 water molecules.
Typical mistakes
Active revision
Explain why boiling a solution of an enzyme abolishes its catalytic activity, referring to the levels of protein structure and the bonds involved.
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Sources: GCE AS and A level subject content for the sciences (Department for Education) · AQA A-level Biology 7402 specification (AQA)
An enzyme lowers activation energy
Rate of an enzyme reaction
Read the initial (steepest) part of a progress curve, where substrate is not yet limiting, to compare conditions fairly.
Rate against substrate concentration
Rate against temperature
In a catalase investigation, 18 cm3 of oxygen was collected in the first 20 seconds. Calculate the mean rate of reaction over this interval in cm3 s^-1.
Volume of oxygen = 18 cm3; time = 20 s.
.
The mean initial rate is 0.90 cm3 s^-1.
Result: 0.90 cm3 s^-1.
Typical mistakes
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An enzyme-controlled reaction produced 24 cm3 of oxygen in the first 30 seconds and 30 cm3 in total after 90 seconds. Calculate the mean initial rate over the first 30 seconds and explain why it is greater than the mean rate over the full 90 seconds.
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Sources: GCE AS and A level subject content for the sciences (Department for Education) · AQA A-level Biology 7402 specification (AQA)
Comparing DNA and RNA
ATP hydrolysis and resynthesis
ATP hydrolase releases usable energy; ATP synthase reverses the reaction during respiration and photosynthesis.
Semi-conservative replication
In a double-stranded DNA molecule, 32% of the bases are adenine. Calculate the percentage of cytosine.
By complementary base pairing, %thymine = %adenine = 32%.
A + T = 32 + 32 = 64%, so C + G = 100 - 64 = 36%.
%cytosine = %guanine, so each is .
Result: Cytosine is 18%.
Typical mistakes
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A sample of double-stranded DNA contains 18% thymine. Calculate the percentage of guanine, showing your reasoning using complementary base pairing.
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Sources: GCE AS and A level subject content for the sciences (Department for Education) · AQA A-level Biology 7402 specification (AQA)
Properties of water and their importance
Heat energy and temperature change
is mass, the specific heat capacity and the temperature change; a high means a large is needed for a given .
Calculate the heat energy needed to raise the temperature of 2.0 kg of water by 1.5 degrees C. Take the specific heat capacity of water as 4200 J kg^-1 degrees C^-1.
with kg, J kg^-1 degrees C^-1, degrees C.
.
J, or 12.6 kJ - a large energy for a small temperature rise, illustrating water's high specific heat capacity.
Result: 12 600 J (12.6 kJ).
Typical mistakes
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Explain how two named properties of water make it suitable as a transport medium in the blood and as a coolant during sweating.
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Sources: GCE AS and A level subject content for the sciences (Department for Education) · AQA A-level Biology 7402 specification (AQA)
References & sources
Department for Education